We illustrate its application with two examples: the functional comparison of proteases and the functional description of the glycolysis network. process comparison, mapping structure–function relationships, etc.). ![]() This computational approach, based on elementary bricks of actions, allows us to calculate on biological functions (e.g. Results: We present a formalism that uses the BioΨ concepts to model biological processes from molecular details to networks. Consequently, there is an obvious need for formal descriptions of biological processes. ![]() ![]() Motivation: In the available databases, biological processes are described from molecular and cellular points of view, but these descriptions are represented with text annotations that make it difficult to handle them for computation.
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